/* @flow */ import mean from "./mean"; import sampleVariance from "./sample_variance"; /** * This is to compute [two sample t-test](http://en.wikipedia.org/wiki/Student's_t-test). * Tests whether "mean(X)-mean(Y) = difference", ( * in the most common case, we often have `difference == 0` to test if two samples * are likely to be taken from populations with the same mean value) with * no prior knowledge on standard deviations of both samples * other than the fact that they have the same standard deviation. * * Usually the results here are used to look up a * [p-value](http://en.wikipedia.org/wiki/P-value), which, for * a certain level of significance, will let you determine that the * null hypothesis can or cannot be rejected. * * `diff` can be omitted if it equals 0. * * [This is used to confirm or deny](http://www.monarchlab.org/Lab/Research/Stats/2SampleT.aspx) * a null hypothesis that the two populations that have been sampled into * `sampleX` and `sampleY` are equal to each other. * * @param {Array} sampleX a sample as an array of numbers * @param {Array} sampleY a sample as an array of numbers * @param {number} [difference=0] * @returns {number|null} test result * * @example * tTestTwoSample([1, 2, 3, 4], [3, 4, 5, 6], 0); // => -2.1908902300206643 */ function tTestTwoSample( sampleX /*: Array */, sampleY /*: Array */, difference /*: ?number */ ) /*: ?number */ { const n = sampleX.length; const m = sampleY.length; // If either sample doesn't actually have any values, we can't // compute this at all, so we return `null`. if (!n || !m) { return null; } // default difference (mu) is zero if (!difference) { difference = 0; } const meanX = mean(sampleX); const meanY = mean(sampleY); const sampleVarianceX = sampleVariance(sampleX); const sampleVarianceY = sampleVariance(sampleY); if ( typeof meanX === "number" && typeof meanY === "number" && typeof sampleVarianceX === "number" && typeof sampleVarianceY === "number" ) { const weightedVariance = ((n - 1) * sampleVarianceX + (m - 1) * sampleVarianceY) / (n + m - 2); return ( (meanX - meanY - difference) / Math.sqrt(weightedVariance * (1 / n + 1 / m)) ); } } export default tTestTwoSample;